一些小脚本

1. OSZICAR最后一行信息

$i $ionstep $F $E $mag(如果有)

for i in {1..80}
do
E=`tail -1 OSZICAR-$i`
inf=`echo $E|cut -d " " -f 1,3,5,10`
echo $i $inf >>energy
done

$AveP = \sum$

2.截断能测试

#!/bin/bash -l
# NOTE the -l flag!
#
#SBATCH -J C60H2
# Default in slurm
# Request run time(h)
#SBATCH -t 230:0:0
#
#SBATCH -p new_q -N 1 -n 24
# NOTE Each small node has 12 cores
#

module load vasp/5.4.4-impi-mkl

# add your job logical here!!!
rm summary
for i in {15..70}
do
ET=`expr $i \* 10`
sed -i "3c ENCUT=$ET" INCAR
mpirun -n 12 vasp_std
E=`tail -1 OSZICAR`
inf=`echo $E|cut -d " " -f 1,3,5,10`
echo $i $inf >>summary
mv OSZICAR OSZICAR-$i
mv CONTCAR CONTCAR-$i
rm WAVECAR DOSCAR
done


3.团簇取胞大小测试(三维真空层测试)

for i in {12..22}
do
cat>POSCAR<<!
Al13
1
$i 0 0
0 $i 0 
0 0 $i
Al
13
Cartesian
1.695820756	0.952639371	1.856287251
-1.695821014	-0.952639637	-1.856287265
0	0	0
-2.058362865	-1.47868117	0.897650999
2.433507217	-1.13868169	0.102854328
0.493702277	-1.593661486	2.108467032
0.113294345	-2.641320534	-0.489615383
-0.493702239	1.593661679	-2.108467135
-2.433507292	1.13868191	-0.102854299
2.058362974	1.478681067	-0.89765081
-0.113294051	2.641320466	0.489615657
-1.080307483	0.742508125	2.347498631
1.080307559	-0.742508211	-2.347498757
!

mpirun -n 12 vasp_std
E=`tail -1 OSZICAR`
inf=`echo $E|cut -d " " -f 1,3,5,10`
echo $i $inf >>summary
mv OSZICAR OSZICAR-$i
mv CONTCAR CONTCAR-$i
rm WAVECAR DOSCAR
done

!!修改POSCARdier行的a会将原子位置也改变(等比缩放),即便是笛卡尔坐标下。